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Table 1 Bisulfite sequencing summary

From: Single-base resolution methylomes of upland cotton (Gossypium hirsutum L.) reveal epigenome modifications in response to drought stress

Samples Total reads Mapped reads Mapping rate (%) mC
percent (%)
mCG
percent (%)
mCHG
percent (%)
mCHH
percent (%)
CK 349,288,166 228,002,142 65.28 201,543,688 (100) 47,879,971 (23.76) 45,874,296 (22.76) 107,789,421 (53.48)
D 379,630,307 256,948,717 67.68 232,876,499 (100) 50,588,873 (21.72) 48,445,561 (20.80) 13,3842,065 (57.47)
Re_W 376,067,028 253,873,809 67.51 215,698,912 (100) 49,367,000 (22.89) 47,336,957 (21.95) 118,994,955 (55.17)
  1. Total reads are the clean sequencing reads after the data filtration. Mapping rate are the reads with unique positions on reference genome after alignments. mC, mCG, mCHG, mCHH percent (%) are the percentages of methylated mC in each context in all methylated cytosines from the whole genome