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Table 1 The amount of initial and cleaned pairwise alignments for each of 7 domestic species investigated

From: Characterization of genome-wide segmental duplications reveals a common genomic feature of association with immunity among domestic animals

Species Initial alignments Cleaned alignments
Cattle 63,978 16,402
Pig 902,537 20,000
Horse 70,532 14,841
Rabbit 338,613 54,768
Goat 54,933 14,403
Sheep 107,362 11,719
Chicken 111,922 25,823
  1. The initial WGAC pairwise alignments were filtered by custom Perl programs. Duplications with 50 or more copies within the genome or present on 3 or more chromosomes were removed, generating cleaned pairwise alignments
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BMC Genomics

ISSN: 1471-2164

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