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Table 1 The amount of initial and cleaned pairwise alignments for each of 7 domestic species investigated

From: Characterization of genome-wide segmental duplications reveals a common genomic feature of association with immunity among domestic animals

Species

Initial alignments

Cleaned alignments

Cattle

63,978

16,402

Pig

902,537

20,000

Horse

70,532

14,841

Rabbit

338,613

54,768

Goat

54,933

14,403

Sheep

107,362

11,719

Chicken

111,922

25,823

  1. The initial WGAC pairwise alignments were filtered by custom Perl programs. Duplications with 50 or more copies within the genome or present on 3 or more chromosomes were removed, generating cleaned pairwise alignments