Table 2 Copy numbers of genes in SD regions for domestic species
Species | Genome assembly | Length of WGAC hits >10kb | Length of WGAC hits >10kb filtered by WSSD | Proportion of filtered WGAC hits |
|---|---|---|---|---|
Cattle | Btau 4.6 (excluding Y) | 69,558,932 | 51,891,155 | 0.746 |
Cattle | UMD 3.1 | 19,740,894 | 18,397,219 | 0.932 |
Pig | Sscrofa 10.2 | 23,482,697 | 20,311,340 | 0.865 |
Horse | EquCab 2.0 | 59,554,690 | 56,165,607 | 0.943 |
Rabbit | OryCun 2.0 | 24,688,548 | 16,130,349 | 0.653 |
Goat | CHIR 1.0 | 2,093,238 | 1,946,680 | 0.930 |
Sheep | Oar_v3.1 | 1,044,992 | 888,894 | 0.851 |
Chicken | Ggallus 4.0 | 3,020,167 | 2,268,769 | 0.751 |