Identification and profiling of Cyprinus carpio microRNAs during ovary differentiation by deep sequencing

BMC Genomics

Table 1 Distribution of sequenced reads from raw data to cleaned sequences

Type	neurula stage		yolk sac complete absorption stage		primordial germ cells stage		juvenile ovary		adult ovary
	Total reads	%	Total reads	%	Total reads	%	Total reads	%	Total reads	%
Raw reads	16247107	100	15228538	100	1696809	100	15722656	100	14604487	100
tRNA	4333	0.24	1	0.19	1037	0.04	465	0.01	2137	0.05
snoRNA	54	0.003	77	0.012	72	0.003	92	0.001	49	0.001
rRNA	127709	6.93	87777	14.07	87728	3.12	63655	0.87	148915	3.34
snRNA	1	0	1	0	0	0	3	0	2	0
Other	1709552	92.83	534674	85.72	2722236	96.84	7213966	99.12	4301005	96.61

ISSN: 1471-2164