From: Analysis of transcriptome data reveals multifactor constraint on codon usage in Taenia multiceps
Length | GC | GC1 | GC2 | GC3 | GC3s | A3s | T3s | G3s | C3s | Gravy | Aromo | CAI | FOP | ENc | PC1 | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Length | ||||||||||||||||
GC | .064** | |||||||||||||||
GC1 | .090** | .663** | ||||||||||||||
GC2 | −0.007 | .605** | .207** | |||||||||||||
GC3 | .050** | .724** | .239** | .063** | ||||||||||||
GC3s | .055** | .738** | .264** | .076** | .995** | |||||||||||
A3s | -.063** | -.655** | -.280** | -.220** | -.728** | -.732** | ||||||||||
T3s | −0.016 | -.613** | -.166** | -.136** | -.805** | -.808** | .264** | |||||||||
G3s | .059** | .303** | .207** | -.249** | .564** | .570** | -.312** | -.409** | ||||||||
C3s | .026* | .535** | .072** | .061** | .802** | .801** | -.592** | -.655** | .033** | |||||||
Gravy | -.047** | −0.009 | -.209** | −0.007 | .140** | .121** | -.319** | -.110** | -.278** | .242** | ||||||
Aromo | -.099** | -.265** | -.486** | -.225** | .080** | .041** | -.076** | 0.015 | -.185** | .265** | .440** | |||||
CAI | .074** | .210** | .124** | -.045** | .302** | .306** | -.377** | 0.002 | .070** | .415** | -.075** | .055** | ||||
FOP | .056** | .397** | .141** | .177** | .426** | .431** | -.445** | -.227** | -.034** | .564** | .007 | .035** | -.769** | |||
ENc | 0.017 | -.217** | -.125** | -.043** | -.243** | -.249** | .337** | .057** | -.063** | -.246** | -.039** | 0.021 | -.310** | -.254** | ||
PC1 | -.073** | -.693** | -.273** | -.142** | -.859** | -.865** | .643** | .704** | -.413** | -.749** | -.083** | -.026* | -.321** | -.433** | .230** | |
PC2 | -.092** | -.062** | -.127** | -.078** | .048** | .040** | .444** | -.438** | .249** | -.108** | -.070** | 0.008 | -.358** | -.352** | .204** | 0 |