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Table 1 Annotation and classification of the small RNAs in the four libraries

From: Small RNA sequencing reveals a role for sugarcane miRNAs and their targets in response to Sporisorium scitamineum infection

Category RCK RT YACK   YAT
  Unique Total Unique Total Unique Total Unique Total
Total reads 13,382,890 36,396,588 12,844,706 27,812,972 12,996,601 27,464,468 14,288,057 28,290,231
miRNA reads 62,110 3,842,212 56,796 2,769,304 58,020 2,117,246 60,639 1,973,307
rRNA reads 149,095 4,535,331 80,458 1,347,015 97,711 1,924,796 76,758 1,102,526
repeat reads 526 1,214 489 1,114 424 1,067 443 1,153
snRNA reads 6,390 25,149 4,072 11,579 4,800 12,774 4,897 12,309
snoRNA reads 4,381 13,333 2,596 5,793 2,676 6,200 2,545 5,375
srpRNA reads 2 2 0 0 0 0 0 0
tRNA reads 28,141 1,578,262 13,362 475,165 16,925 588,689 12,665 323,280
Unannotaed sRNA reads 13,132,245 26,401,085 12,686,933 23,203,004 12,816,045 22,813,696 14,130,110 24,870,281
  1. RCK and YACK: ROC22 and YA05-179 under sterile water stress after 48 h, respectively; RT and YAT: ROC22 and YA05-179 under Sporisorium scitamineum stress after 48 h, respectively