From: A scalable and memory-efficient algorithm for de novo transcriptome assembly of non-model organisms
H. gla | Trans-ABySS | ASplice | ||||||||
---|---|---|---|---|---|---|---|---|---|---|
 |  |  | R. nor | unique | mem | splicing |  | R. nor | unique | mem |
k_c | trans | N50 | hits | hits | (GB) | graphs | N50 | hits | hits | (GB) |
25_50 | 97640 | 970 | 40391 | 13592 | 19 | 110379 | 533 | 35671 | 13056 | 9 |
25_100 | 62495 | 714 | 34433 | 11758 | 19 | 71037 | 445 | 30442 | 11558 | 9 |
25_200 | 37371 | 527 | 24940 | 9059 | 19 | 42666 | 359 | 21515 | 9371 | 9 |
31_50 | 91149 | 987 | 38346 | 13415 | 20 | 116375 | 457 | 38271 | 12900 | 9 |
31_100 | 59730 | 695 | 33864 | 11510 | 20 | 73734 | 381 | 31369 | 11356 | 9 |
31_200 | 35292 | 503 | 24404 | 8703 | 20 | 42180 | 320 | 21110 | 9084 | 9 |