No evidence for a bovine mastitis Escherichia coli pathotype

BMC Genomics

Table 2 Virulence-/fitness-associated genes significantly associated in MAEC or commensal isolates, as well as phylogroups A or B1

Gene/locus tag	Accession number	VF class	Phylogroup association, enrichment
MAEC-enriched virulence-/fitness-associated gene
eprI	YP_006097353	T3SS/ETT2	significantly A-associated
Commensal-enriched virulence-/fitness-associated genes
EC042_1639	YP_006095949	CU fimbriae	significantly B1-associated
ydeT	YP_006095947	CU fimbriae	significantly B1-associated
iucA	NP_755502	Iron uptake	no hit
iucB	NP_755501	Iron uptake	no hit
iucC	NP_755500	Iron uptake	no hit
iucD	NP_755499	Iron uptake	no hit
iutA	NP_755498	Iron uptake	no hit
shiF	NP_755503	Iron uptake	no hit

MAEC mastitis-associated E. coli, CU chaperone usher, T3SS type III secretion system, ETT2 E. coli T3SS 2

ISSN: 1471-2164