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Fig. 6 | BMC Genomics

Fig. 6

From: Cattle genome-wide analysis reveals genetic signatures in trypanotolerant N’Dama

Fig. 6

Genes identified based on the MI and XP-EHH for N’Dama breed. a Correlation network of 117 genes selected using the MI and XP-EHH of SNP types between N’Dama and Ogaden breeds is demonstrated. Circles denote genes identified by the intersection of MI and XP-EHH and dark grey octagons represent the genes annotated in the result of GO analysis. Dark red edges indicate strong positive correlations and dark green edges are strong negative correlations (gene pairs with a correlation coefficient value larger than 0.9 or smaller than -0.5 are connected). b GO analysis on the selected genes by adjusting thresholds from the constructed correlation network is presented (excluding miRNAs). A vertical line represents an FDR-adjusted p-value (0.05). c The genotype profiles of the identified genes, SP1, SP7 and CARD11, for each SNP position clearly reveal different patterns between N’Dama and Ogaden breeds. Table shows the types of SNP allele for each breed. Values in the parentheses represent the numbers of samples with each allele for three genes

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