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Fig. 2 | BMC Genomics

Fig. 2

From: In silico pathway analysis and tissue specific cis-eQTL for colorectal cancer GWAS risk variants

Fig. 2

eQTL for rs3802842 in Normal Sigmoid and Transverse Colon Tissue. a Box plots of gene expression profiles for COLCA2, COLCA1, and c11orf53, expression by genotype in normal sigmoid and transverse colon tissue. Reference Allele (risk allele) = C; Alternate Allele = A. b cis-eQTLs (+/− 1 Mb window) for COLCA2 in normal sigmoid and transverse colon tissue. rs3802842 is indicated by the green asterisk (*). c cis-eQTLs for COLCA2 in 16 different tissue types. Bubble size represents –log10 (p-value) and color and shading of the bubble represents effect size of the cis-eQTL

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