Analysis | Â | PacBio non-corrected | LoRDEC Trinity normalized reads |
---|---|---|---|
Total transcripts | Â | 107,604 | 107,598 |
Evigene prediction | Okay transcripts | 18,190 | 51,025 |
Main transcripts | 14,124 | 25,012 | |
Alternate transcripts | 4,066 | 26,013 | |
GC% | 61.8 | 51.4 | |
CEGMA alignment (%) | Â | 96.4 | 97.98 |
BUSCO notation (%) | Â | 87.13 | 90.27 |
ORFs detected | Minimum 300Â bp | 243,637 | 252,491 |
ORF N50 (bp) | 570 | 888 | |
Protein counts covered ≥90% |  | 9.727 | 12,611 |
Transcripts mapped to sorghum genome (%) | Â | 66.43 | 69.44 |