Insights into the ancestral organisation of the mammalian MHC class II region from the genome of the pteropid bat, Pteropus alecto

Table 2 Coordinates of Bat class II S-X-Y motifs within the MHC-II genomic region on scaffold202

Gene Name	Strand	Gene Start	S-X-Y Start	S-X-Y End	S-X-Y Relative Position (S-X-Y End to Gene Start)
DMA	+	779647	779475	779555	−92
DMB	+	788588	Not found	Not found	n/a
DOA	+	734481	734305	734363	−118
DOB	+	904258	904074	904121	−137
DPB1 ψ	-	703197	Not found	Not found	n/a
DQA1	-	Not found	Not found	Not found	n/a
DQA2	-	1064301	1064483	1064419	118
DQB1	+	924949	924738	924799	−150
DQB2	+	1039500	1039285	1039348	−152
DRA	-	1213079	1213260	1213211	132
DRB1	+	Not found	Not found	Not found	n/a
DRB2 ψ	+	Not found	Not found	Not found	n/a

ISSN: 1471-2164