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Fig. 3 | BMC Genomics

Fig. 3

From: Discrimination of candidate subgenome-specific loci by linkage map construction with an S1 population of octoploid strawberry (Fragaria × ananassa)

Fig. 3

Physical positions on F. vesca pseudomolecules (v2.0.a1) of the designed and mapped PHR-SNPs on the ‘Reikou’ linkage map. All the SNPs designed on the Axiom® array and mapped PHR and NMH SNPs on HGs are shown with gray and black bars, respectively. Fragmentized LGs in HG6, LG6A-1 and LG6A-2 were jointed, because both of the LGs showed large numbers of Y-N haploSNPs corresponding to the F. vesca genome and mapped non-overlapped positions on the F. vesca genome (see also the text). The black line at the distal end of the SNP designed position (gray column) shows the maximum length of the F. vesca genome v2.0.a1. The SNP positions of LG A, BI, BII, BIII, and BIV are shown by blue, green, yellow, pink, and red colored lines, respectively

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