Table 1 A-to-G mismatches resulting in amino acid changes
From: Evidence for transcriptome-wide RNA editing among Sus scrofa PRE-1 SINE elements
Position | Gene symbol/ID | AA | SIFT | Tissues |
|---|---|---|---|---|
1:63408856 | ENSSSCG00000029003 | L/P | tolerated (1) | Fat LD Liver |
1:125424444 | ENSSSCG00000024660 | Q/R | tolerated (1) | Fat LD Liver |
2:12622576 | LDHB | I/M | tolerated (1) | Fat LD Liver |
2:49316285 | ARNTL | K/E | tolerated low confidence (1) | Liver |
4:98044799 | COPA | I/V | deleterious (0.02) | Fat |
5:42375023 | KRR1 | I/T | deleterious (0.01) | Liver |
6:92516721 | PTPRM | K/R | tolerated (1) | Fat |
6:146168578 | NDC1 | E/G | deleterious (0.01) | Liver |
7:62951442 | NEIL1 | K/R | deleterious (0.02) | Fat LD |
7:81602273 | ENSSSCG00000002045 | C/R | tolerated (1) | Fat LD Liver |
7:102789222 | ACOT4 | T/A | tolerated (0.61) | Fat |
7:129322238 | RPS21 | C/R | - | Fat LD Liver |
8:28015971 | ENSSSCG00000008767 | H/R | tolerated (1) | Fat LD Liver |
8:31629014 | TLR1 | I/V | tolerated (1) | Liver |
8:32309809 | RPL9 | I/V | tolerated (0.4) | Fat |
8:32309814 | RPL9 | E/G | deleterious (0.01) | Fat |
8:48244993 | GRIA2 | Q/R | tolerated (0.07) | Fat |
9:41146365 | ENSSSCG00000023913 | Q/R | deleterious (0.04) | Fat |
9:74510703 | ENSSSCG00000015294 | K/R | tolerated (0.13) | Liver |
9:83273454 | SLC25A13 | E/G | deleterious (0.02) | LD |
11:22178068 | COG3 | I/V | tolerated (1) | Fat LD Liver |
12:20231860 | AOC3 | Q/R | tolerated (1) | Liver |
13:131377159 | EIF2B5 | Q/R | tolerated (1) | Fat |
13:156760971 | UBE2B | D/G | tolerated (0.48) | Fat LD Liver |
13:206979572 | SON | R/G | - | Fat |
14:40832826 | PLBD2 | R/G | tolerated low confidence (0.12) | Fat |
14:52398588 | IGLV-3 | E/G | tolerated (0.05) | Fat |
14:59613334 | LYST | S/G | - | LD |
14:81796679 | OIT3 | S/G | tolerated (1) | Liver |
15:59811585 | HNRNPA2B1 | L/P | tolerated (0.35) | Fat LD Liver |
15:98217885 | ENSSSCG00000028949 | R/G | tolerated low confidence (1) | Fat LD Liver |
16:29335640 | ENSSSCG00000016869 | N/D | tolerated (1) | Fat LD |
16:42512978 | ELOVL7 | S/G | tolerated (1) | Fat |
17:46041505 | BLCAP | Y/C | deleterious (0) | Fat Liver |