Parameters
|
R e s u l t s
|
|---|
N
|
r
|
α
| # SNP x 103
| #Freq SNP | % seg CHs | % seg Y/Y |
124 | 48 | 5 | 50 | 6070 | 85 | 6.9 |
250 | 48 | 2 | 270 | 42333 | 98 | 12.5 |
250 | 48 | 3 | 146 | 16092 | 82 | 4.6 |
250 | 48 | 5 | 103 | 9644 | 73 | 5.5 |
250 | 48 | 10 | 80 | 6682 | 65 | 4.9 |
250 | 24 | 5 | 93 | 7045 | 96 | 25.4 |
250 | 12 | 5 | 82 | 5255 | 99 | 49.2 |
250 | 6 | 5 | 73 | 3863 | 100 | 69.0 |
500 | 48 | 5 | 193 | 12754 | 49 | 3.0 |
500 | 48 | 10 | 160 | 9109 | 55 | 2.6 |
1000 | 48 | 5 | 407 | 17724 | 35 | 2.0 |
2000 | 48 | 5 | 802 | 24897 | 25 | 1.1 |
- This table presents an overall summary of the investigated chromosomal segments resulting from the analyses performed with different sets of SNPs according to their minor allele frequency (MAF threshold, shown in column 1). While column 2 shows total number of segments obtained in each experiment (see M&M for illustration), columns 3, 4, and 6 presents the number of segments with CHs, Yin/Yang haplotypes and Mosaic haplotypes respectively. Column 5 gives the percentage of total segments having Yin/Yang haplotypes
- Column four represents the total number of SNPs in the population of virtual individuals. Column five demonstrates the number of frequent SNPs (MAF >25%) in the same modeling population. Column six represents percentages of segments that have one or more CHs (with frequency > =5% in the modeling population), while last column – percentages of segments with Yin/Yang CHs
