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Table 3 Average type 1 error rates of the statistic for testing interaction between two genes with marginal effects at two genes over 10 pairs of genes

From: Functional regression method for whole genome eQTL epistasis analysis with sequencing data

  Rare Variants Common & Rare Variants
Sample Size 0.05 0.01 0.001 0.05 0.01 0.001
1000 0.0501 0.0108 0.0011 0.0486 0.0103 0.0010
2000 0.0493 0.0098 0.0010 0.0495 0.0101 0.0010
3000 0.0499 0.0095 0.0011 0.0497 0.0101 0.0011
4000 0.0494 0.0099 0.0010 0.0496 0.0096 0.0008
5000 0.0489 0.0097 0.0011 0.0497 0.0107 0.0010