Fig. 2From: Co-expressed Pathways DataBase for Tomato: a database to predict pathways relevant to a query geneEffect of internal correlation in pathways. The average of −l o g10p-values (y-axis) was plotted against the internal correlation (x-axis), and the correlation coefficient between x and y, represented as r, was calculated. The ORA of the top (a) 100, (b) 500, and (c) 3000 ranked genes and (d) the GSEA of the ranked gene list are presentedBack to article page