Table 2 Summary of sequencing and transcriptome assembly results
Sequencing (for de novo transcriptome) | |
 Raw reads (101 nt paired-end) | 179472918 pairs |
 Cleaned reads | 159812653 pairs |
14974970Â orphans | |
 Sequenced bases (cleaned) | 31.8 Gb |
Assembly | |
 Number of transcripts (contigs) | 31624 |
 Number of unigenes | 17595 |
 Mean length (unigene) | 1420.69 bp |
 Median length (unigene) | 909 bp |
 N50 (unigene) | 2416 bp |
 Assembled length (unigenes) | 25.0 Mb |
 GC content (unigenes) | 38.8% |
 Number of protein-coding ORFs | 13991 |
 Mean ORF length | 1058.4 bp |
BUSCO arthropod gene set (2675 genes) | |
 Complete, single-copy | 1875 (70.1%) |
 Complete, duplicated | 72 (2.7%) |
 Partial | 165 (6.2%) |
 Missing | 563 (21.0%) |