Skip to main content
Fig. 2 | BMC Genomics

Fig. 2

From: Hierarchical genomic analysis of carried and invasive serogroup A Neisseria meningitidis during the 2011 epidemic in Chad

Fig. 2

wgMLST and wgSNP Neighbor Net Tree. The genomic relationship based on wgMLST (2a) and wgSNP (2b) between the Chad NmA isolates is depicted in relation to the reference genome WUE2594. Three clusters are observed and labeled on both trees. The invasive isolates are depicted in red and the carried ones in yellow. The rSTs contained in each cluster are also indicated as well as age and region of the patient/healthy volunteer are indicated when available, ND corresponds to the absence of any epidemiological information for the specific isolate (2a). The tree were produced based on a comparison in terms of n = 2070 loci defined in the reference genome (2a) and the 1942 SNPs identified (2b)

Back to article page

BMC Genomics

ISSN: 1471-2164

Contact us