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Table 2 Summary of annotations of the N. officinale transcripts

From: De novo transcriptome analysis and glucosinolate profiling in watercress (Nasturtium officinale R. Br.)

 

Number of BLASTed transcripts

Ratio (%)

All transcripts

69,635

100

Transcripts BLASTed against NR

57,550

82.65

Transcripts BLASTed against NT

61,020

87.63

Transcripts BLASTed against SWISS-PROT

46,249

66.42

Transcripts BLASTed against BRAD

60,335

86.64

Transcripts BLASTed against TAIR

61,369

88.13

Transcripts BLASTed against COG

16,530

23.74

Transcripts BLASTed against GO

45,402

65.20

All annotated transcripts

64,876

93.17

  1. NR NCBI non-redundant protein database, NT NCBI nucleotide database, SWISS-PROT SwissProt protein database, BRAD Brassica rapa protein database, TAIR Arabidopsis protein database, COG Clusters of Orthologous Group, GO Gene Ontology