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Table 3 Results of 10 iPINBPA runs

From: Genome-wide network-based pathway analysis of CSF t-tau/Aβ1-42 ratio in the ADNI cohort

SRN

# of Subnetworks

TN Size

TNStartNode

TN Score

1

1058

99

PRKCA

10.11

2

918

92

PRKCA

9.70

3

975

151

TP53

10.95

4

1100

133

-

10.52

5

977

108

PRKCA

9.85

6

936

135

-

10.64

7

1166

101

PRKCA

9.41

8

1050

147

-

11.27

9

972

67

TP53

8.04

10

955

146

-

11.25

  1. SRN:The seed value used for an iPINBPA run
  2. # of Subnetworks: The number of subnetworks identified in an iPINBPA run
  3. TN Size: The number of genes in the top subnetwork identified in an iPINBPA run
  4. TN StartNode: The start node of the top subnetwork
  5. TN Score: The score of the top subnetwork