In-depth genome characterization of a Brazilian common bean core collection using DArTseq high-density SNP genotyping

Table 3 Genetic diversity and divergence among cultivars/lines and landraces of the Andean and Mesoamerican gene pools

Group		S	P	NAP	H_O (SE)	H_E (SE)	F (SE)	F_ST (SE)	F_IS (SE)	F_IT (SE)
Mesoamerican	Cult/Lines^a	57	87.51%	463	0.038 ± 0.001	0.177 ± 0.003	0.652 ± 0.006	0.031 ± 0.001	0.836 ± 0.001	0.841 ± 0.001
	Landraces	54	90.78%	627	0.040 ± 0.001	0.185 ± 0.002	0.646 ± 0.006	0.031 ± 0.001	0.836 ± 0.001	0.841 ± 0.001
	Total	111	100.00%	-	0.039 ± 0.001	0.185 ± 0.002	0.652 ± 0.006
Andean	Cult/Lines^a	31	88.39%	1217	0.046 ± 0.002	0.145 ± 0.002	0.647 ± 0.007	0.012 ± 0.002	0.738 ± 0.001	0.741 ± 0.001
	Landraces	33	73.49%	533	0.050 ± 0.002	0.099 ± 0.002	0.377 ± 0.007	0.012 ± 0.002	0.738 ± 0.001	0.741 ± 0.001
	Total	64	100.00%	-	0.048 ± 0.002	0.123 ± 0.002	0.561 ± 0.007

The sample size (S), percentage of polymorphic loci (P), number of private alleles (NAP), observed heterozygosity (H _O), gene diversity (H _E), inbreeding coefficient (F), genetic differentiation (F _ST), fixation index (F _IS), total inbreeding (F _IT), and standard deviations (SE) are presented
^aCult/Lines: cultivars/lines

ISSN: 1471-2164