Table 1 Categorization of genes with significantly decreased expression (Bonferroni p < 0.05) in Z63, Z23 and VL1 strains in comparison to S288c, at T1 (5 g/L of CO2 released). Genes common to the three strains are underlined
MIPS functional category | Strain | ||
|---|---|---|---|
Z63 | Z23 | VL1 | |
pheromone response, mating-type determination, sex-specific proteins | AFR1 ASG7 BAR1 DIG1 EXG1 FAR1 FUS1 FUS3 GIC2 GPA1 HO MFA1 MFA2 PHO81 PRY1 RDH54 SPA2 SST2 STE18 STE2 STE23 STE4 STE5 STE6 UBC4 | AGA1 ASG7 BAR1 DIG1 FAR1 FUS1 FUS3 GIC2 GPA1 HO HSP82 MFA1 MFA2 PHO81 PRY1 RDH54 SST2 STE18 STE2 STE23 STE4 STE5 STE6 | AFR1 ASG7 ASH1 BAR1 BEM1 CLN2 DIG1 FAR1 FUS1 FUS3 GFA1 GIC2 GPA1 HO MCK1 MFA1 MFA2 PHO81 PRY1 RDH54 SAG1 SAN1 SIR2 SST2 STE18 STE2 STE23 STE4 STE5 STE6 |
degradation of asparagine, metabolism of aspartate | ASP3–1 ASP3–2 ASP3–3 ASP3–4 | ASP1 ASP3–1 ASP3–2 ASP3–3 ASP3–4 | ASP1 ASP3–1 ASP3–2 ASP3–3 ASP3–4 |