Skip to main content

Table 1 The function comparison between lncRNA-screen and other publically available software

From: lncRNA-screen: an interactive platform for computationally screening long non-coding RNAs in large genomics datasets

  lncRNA-screen coRAL RNA-CODE lncRScan iSeeRNA CIRI Annocript LncRNA2Function
Stand-alone server  
Parallel computing        
Online server       
Raw data support  
Processed data support       
TCGA, GEO, SRA data automatic download        
Known lncRNA identification      
Novel lncRNA identification     
Differential expression analysis   
ChIP-seq histone mark integration        
Hi-C data integration        
lncRNA genome snapshots        
Interactive lncRNA report