Fig. 3

a Counts of differentially expressed genes (DEGs) identified in the comparison between R- and S-NILs at pre-infestation, 6, 12, and 48 h after infestation, filtered with false discovery rate (FDR) < 0.1, |log2fold change (R/S)| > 1, and average read count >10. R-NIL indicates the number of DEGs upregulated in R-NIL, while S-NIL does those upregulated in S-NIL at each time point. b Venn diagram displaying the detailed distribution of DEGs