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Table 4 Cerebellar expression patterns of genes with most significant switching events at E14.5 from the in situ database, Genepaint

From: Relatively frequent switching of transcription start sites during cerebellar development

Gene

Full name

Genepaint

DLG3

discs, large homolog 3

N/E

SLC12A5

solute carrier family 12, member 5

N/E

PDE4D

phosphodiesterase 4D

NE, interior cerebellum

IQSEC1

IQ motif and Sec7 domain 1

N/E

CNTNAP2

contactin associated protein-like 2

RL specific

CNPY1

canopy 1 homolog

N/A

MAPK8IP1

mitogen activated protein kinase 8 interacting protein 1

specific cerebellar nuclei, spinal cord

DLGAP4

discs, large homolog-associated protein 4

widespread cerebellum

ANK3

ankyrin 3, epithelial

interior cerebellum

CACNB4

calcium channel, voltage-dependent, beta 4 subunit

N/E

ANP32a

acidic (leucine-rich) nuclear phosphoprotein 32 family

strong, EGL & NE specific staining

TMX3

thioredoxin-related transmembrane protein 3

N/A

APBB3

amyloid beta (A4) precursor protein-binding, family B, member 3

N/E

PRMT8

protein arginine N-methyltransferase 8

widespread cerebellum

EDNRB

Mus musculus endothelin receptor type B

strong NE specific staining

SEMA4G

sema domain 4G

widespread cerebellum

FBLN5

fibulin 5

N/E

ZRANB1

zinc finger, RAN-binding domain containing 1

N/E

ZBTB38

zinc finger and BTB domain containing 38

N/A

IBTK

inhibitor of Bruton agammaglobulinemia tyrosine kinase

N/E

GPC6

glypican 6

Strong NE, NTZ specific staining

HSPH1

heat shock 105 kDa/110 kDa protein 1

N/A

ZFP451

Mus musculus zinc finger protein 451

moderate EGL staining

GRAMD1B

GRAM domain containing 1B

N/E

  1. N/E not expressed or ineffective probe, NE neuroepithelium, RL Rhombic lip, EGL external granular layer, NTZ nuclear transitory zone, N/A data not available