Table 1 SNP information for DEGs on Chr_D05
Gene | Chromosome | Start | End | TM-1 | Three line | Annotation | Mutationtype | Gene Annotation | fpkm | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
B | A | R | B | A | R | ||||||||
Gh_D05G0901 | D05 | 7604314 | 7604314 | A | A | A | C | downstream | • | 17.3 kDa class I heat shock protein | 17.4828 | 13.6636 | 29.6254 |
Gh_D05G0972 | D05 | 8,177,118 | 8,177,118 | A | A | A | G | exonic | • | probable aquaporin PIP2–2 | 1.85272 | 5.44079 | 3.00306 |
Gh_D05G2138 | D05 | 20,020,319 | 20,020,319 | T | T | T | C | downstream | • | protein DMR6-LIKE OXYGENASE 2-like | 0.32569 | 1.99919 | 2.05069 |
Gh_D05G2233 | D05 | 21,298,396 | 21,298,396 | A | A | A | T | downstream | • | uncharacterized protein | 7.05292 | 14.1268 | 20.0803 |
Gh_D05G3043 | D05 | 40,631,403 | 40,631,403 | G | G | G | A | exonic | • | lipid phosphate phosphatase 2-like | 1.77645 | 2.15516 | 3.76462 |
Gh_D05G3129 | D05 | 46,402,209 | 46,402,209 | A | A | A | G | downstream | • | cytochrome P450 like_TBP | 3.20327 | 1.11014 | 11.0941 |
Gh_D05G3141 | D05 | 46,856,961 | 46,856,961 | A | A | A | C | exonic | • | small ubiquitin-related modifier 1-like | 14.5079 | 20.2293 | 40.4531 |
Gh_D05G3211 | D05 | 49,817,512 | 49,817,512 | T | T | T | A | exonic | • | elongation factor 2 | 59.3663 | 48.7858 | 26.7643 |
Gh_D05G3427 | D05 | 55,765,423 | 55,765,423 | A | A | A | T | exonic | • | proton pump-interactor 1-like | 0 | 0 | 5.70722 |
Gh_D05G3508 | D05 | 57,898,849 | 57,898,849 | A | A | A | G | exonic | synonymous | (+)-delta-cadinene synthase | 7.73005 | 0.79699 | 0.82779 |
Gh_D05G3696 | D05 | 61,550,775 | 61,550,775 | A | A | A | G | exonic | • | probable LRR receptor-like serine/threonine-protein kinase | 1.43551 | 0.94060 | 0.59621 |