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Table 4 List of prophages identified in P. aeruginosa ATCC 27853

From: Comparative genome and transcriptome analysis reveals distinctive surface characteristics and unique physiological potentials of Pseudomonas aeruginosa ATCC 27853

Prophage ID Score Normalized Coordinate range Length Win size Close phage
Prophage 1 15.3525 0.9031 683,173–696,044 12,871 20 phi CTX
Prophage 2 63.7992 1.3292 797,729–836,333 38,604 50 B3
Prophage 3 44.6107 0.6759 1,337,276–1,379,950 42,674 100 F10/lambda
Prophage 4 53.0771 0.8042 2,508,898–2,560,402 51,504 100 D3/ES18
Prophage 5 47.7643 0.7582 5,093,820–5,142,761 48,941 100 phi CTX
Prophage 6 1.6659 0.0490 5,504,457–5,531,885 27,428 50 B3
Prophage 7 13.3825 0.8364 5,783,641–5,794,256 10,615 20 Pf1
  1. Score. It is a significance score from Prophinder, more reliable prediction with higher score
  2. Normalised. Each significant score is normalized based on its number of CDS
  3. Win size. Prophinder runs with different window sizes to screen the genome. Here is reported with which window size the prophage was detected