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Table 4 List of prophages identified in P. aeruginosa ATCC 27853

From: Comparative genome and transcriptome analysis reveals distinctive surface characteristics and unique physiological potentials of Pseudomonas aeruginosa ATCC 27853

Prophage ID

Score

Normalized

Coordinate range

Length

Win size

Close phage

Prophage 1

15.3525

0.9031

683,173–696,044

12,871

20

phi CTX

Prophage 2

63.7992

1.3292

797,729–836,333

38,604

50

B3

Prophage 3

44.6107

0.6759

1,337,276–1,379,950

42,674

100

F10/lambda

Prophage 4

53.0771

0.8042

2,508,898–2,560,402

51,504

100

D3/ES18

Prophage 5

47.7643

0.7582

5,093,820–5,142,761

48,941

100

phi CTX

Prophage 6

1.6659

0.0490

5,504,457–5,531,885

27,428

50

B3

Prophage 7

13.3825

0.8364

5,783,641–5,794,256

10,615

20

Pf1

  1. Score. It is a significance score from Prophinder, more reliable prediction with higher score
  2. Normalised. Each significant score is normalized based on its number of CDS
  3. Win size. Prophinder runs with different window sizes to screen the genome. Here is reported with which window size the prophage was detected