Construction of high-density genetic map and QTL mapping of yield-related and two quality traits in soybean RILs population by RAD-sequencing

Table 3 Novel QTLs detected in Zhonghuang 24 × Huaxia 3 RILs population in 2 years

QTL Name	Chr^a: Physical position	LOD^b	Additive effect	R² (%)^c
qPH04a^d	Chr04:3,836,380–5,131,478	8.21	7.73	15.71
qPH12a-1	Chr12:3,159,855–3,277,139	2.63	3.83	4.30
qPH12a-2	Chr12:4,498,030–4,639,202	3.97	4.61	6.53
qPH14a-2	Chr14:4,294,621–4,447,181	2.85	3.90	4.59
qPH04b^d	Chr04:3,815,206–3,836,379	9.56	8.78	21.53
qPH06b-1	Chr06:4,124,778–4,212,333	2.70	−4.03	5.55
qNN04a-1^d	Chr04:3,740,934–3,781,822	5.29	0.83	9.10
qNN04a-2	Chr04:3,836,380–5,131,478	5.09	0.86	9.59
qNN19a^d	Chr19:45,081,886–45,138,371	15.63	−1.48	32.56
qNN04b^d	Chr04:3,657,048–3,740,933	7.78	1.33	17.68
qNN19b^d	Chr19:45,081,886–45,138,371	3.15	−0.76	6.60
qNN05b	Chr05:3,507,805–3,602,613	3.05	0.75	6.41
qBN04a	Chr04:3,657,048–3,740,933	6.64	0.55	13.44
qBN11a	Ch11:15,949,203–16,152,966	2.62	0.32	4.97
qBN05b	Chr05:5,079,314–5,122,378	3.52	0.46	9.74
qBN08b	Chr08:2,480,340–2,712,994	2.61	−0.37	6.29
qEP07a	Chr07:15,331,902–15,518,862	2.79	−5.35	6.78
qEP11a^d	Chr11:16,152,967–16,449,587	3.07	5.52	6.96
qEP04b	Chr04:3,657,048–3,740,933	2.56	5.18	6.17
qEP11b^d	Chr11:15,328,134–15,527,096	3.78	6.05	9.31
qSW20b-1	Chr20: 811,292–1,045,131	2.92	0.60	7.81
qIP17a^d	Chr17:38,624,564–38,676,793	2.70	0.8285	5.80
qIP17b^d	Chr17:38,167,697–38,257,004	2.78	0.938	6.89
qPro10a	Chr10:47,767,595–47,857,932	4.06	−0.47	9.49
qPro13a	Chr13: 19,893,079–20,804,523	3.39	0.42	7.91
qPro17b	Chr17: 11,691,747–11,743,779	3.43	−0.34	9.29

^aChr indicates chromosome
^bLOD indicates the logarithm of odds score
^cPercentage of phenotypic variation explained
^dmarked by QTL name indicates a new, stable QTL that was detected in both years

ISSN: 1471-2164