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Table 3 Meiosis-related genes in D. coronatus

From: Genome analysis of Diploscapter coronatus: insights into molecular peculiarities of a nematode with parthenogenetic reproduction

Gene (alias)a

Presenceb

Homolog/ Orthologc

Gene (alias)a

Presenceb

Homolog/ Orthologc

air-2

+

Aurora/IPL Kinase

mes-4

+

WHSC1; SETDB1

aspm-1

+

ASPM

met-1

+

SETD2

atm-1

−

ATM

met-2

+

SETDB1

brc-1

+

BRCA1

mix-1

+

SMC2

brc-2

−

BRCA2

mpk-1

+

ERK

capg-1

+

hCAP-G

mre-11

+

MRE11A

capg-2

+

hCAP-G2

mrg-1

+

Chromodomain protein

cep-1

−

p53

mrt-2

+

RAD1

chk-2

+

CHK2

msh-4 (him-14)

+

MSH4

cls-2

+

CLASP

msh-5

+

MSH5

cmd-1

+

CALM1

mus-81

+

MUS81

coh-3

−

Rad21/Rec8

pch-2

+

TRIP13

coh-4

−

Rad21/Rec8

plk-1

+

PLK1

com-1

−

CtlP / Sae2

plk-2

+

PLK1

cosa-1

+

CTND1

pph-4.1

+

PPP4C

cra-1

+

NAA25

prom-1

+

FBXO47

cye-1

+

CCNE1

rad-50

+

RAD50

dpy-26

+

hCAP-H

rad-51

+

Rad51; DMC1

dpy-28

+

hCAP-D2

rad-54

+

Rad54

dsb-1

−

 

rec-1

−

 

dsb-2

−

 

rec-8

−

Rec8

egl-1

−

 

rfs-1

+

RAD51C

exo-1

+

exo1

rpa-1

+

RPA1

fcd-2

−

FANCD2

rtel-1

+

RTEL1

gsp-2

+

PP1CA

scc-2 (pqn-85)

+

SCC2

hal-2

−

 

scc-3

+

SCC3

hcp-6

+

hCAP-D3

slx-1

+

SLX1

helq-1 (hel-308)

+

HELQ

smc-1 (him-1)

+

SMC1

him-3

−

HORMAD1; Hop1

smc-3

+

SMC3

him-5

−

 

smc-4

+

SMC4

him-6

+

BLM; RecQ

smc-5

+

SMC5

him-8

−

 

smc-6

+

SMC6

him-17

−

 

spd-3

+

 

him-18

+

SLX4

spo-11

+

SPO11

him-19

+

 

sun-1

+

SUN-domain family

hpr-9

+

RAD9

syp-1

−

 

htp-1

+

HORMAD1; Hop1

syp-2

−

 

htp-2

+

HORMAD1; Hop1

syp-3

−

 

htp-3

−

HORMAD1; Hop1

syp-4

−

 

hus-1

+

HUS1

tim-1

+

TIMELESS

kle-2

+

hCAP-H2

unc-116

+

Kinesin 1

klp-18

+

 

xnd-1

−

 

klp-19

+

Chromokinesin

xpf-1

+

ERCC4

lab-1

−

 

zhp-3

+

RNF212; Zip3

lin-5

+

NuMA

zim-1

−

 

lin-41

+

 

zim-2

−

 

mei-1

+

KATNAL1

zim-3

−

 

mei-2

−

 

zyg-12

+

KASH-domain family

  1. aMeiosis-related genes in C. elegans (modified from [49])
  2. bPresence (+) or absence (−) of their D. coronatus homologs based on InParanoid analysis
  3. cNames of the respective orthologous or homologous genes in other organisms