Table 2 Summary of DGE data obtained after two independent biological replicate and its statistical analysis
Total Unigenes available | Â | 2,46,584 | Â | Â |
No. of unigenes in each category for Root and Shoot samples | Total | Up | Down | Neutral |
No. of unigenes expressed in both samples | 188,802 | 36,262 | 33,556 | 118,984 |
No. of unigenes expressed only in Root sample | 40,055 | NA | NA | NA |
No. of unigenes expressed only in Shoot sample | 5531 | NA | NA | NA |
No. of P-significant unigenes | 10,871 | 6951 | 3920 | 0 |
No. of Q-significant unigenes | 3659 | 2345 | 1314 | 0 |
Software used for carrying out DGE | DESeq | Â | Â | Â |
Sample taken as control for DGE | Root | Â | Â | Â |
Sample taken as Treated for DGE | Shoot | Â | Â | Â |