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Table 6 Correlation between gene expression and copy number for the robust probes used in the DASL assay (P1–3-identity of the probes used to assess each gene in the DASL assay) (Correlation between copy number and gene expression: 25% of probes >0.26 and 50% probes >0.14)

From: Integrative analysis of copy number and gene expression in breast cancer using formalin-fixed paraffin-embedded core biopsy tissue: a feasibility study

Gene name and DASL probe number Correlation between expression and copy number 95% Confidence Interval
ESR1-P2 0.483 [0.161–0.712]
JUND-P1 0.490 [0.06–0.766]
MUC1-P2 0.497 [0.144–0.738]
BIRC5-P1 0.500 [0.17–0.729]
RAN-P1 0.503 [0.152–0.741]
RELA-P1 0.525 [0.172–0.758]
BIRC5-P2 0.527 [0.205–0.745]
COMT-P1 0.556 [−0.026–0.857]
FGFR1-P1 0.575 [0.283–0.769]
GRB7-P1 0.585 [0.192–0.816]
ERBB2-P1 0.733 [0.43–0.888]
CCND1-P1 0.773 [0.512–0.903]
HER-2-P2 0.800 [0.553–0.918]