From: Integrative analysis of copy number and gene expression in breast cancer using formalin-fixed paraffin-embedded core biopsy tissue: a feasibility study
Clinical characteristic
Genes where copy number and expression correlation >0.75
Pathological complete response
TNFAIP1, JUND, HER-2, NFKBIA, PDGF, IL13, CCND1
Genes associated with ER-negative status
GRB2, HER-2, STAT3, CCND1, MUC1, FGFR3