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Table 1 Summary of the quality of the transcriptome for each taxon, including percent of cleaned reads mapped, Trinity genes, total transcripts, percent GC, N50, median contig length, average contig length, and total assembled bases

From: Comparative transcriptomic analysis of the evolution and development of flower size in Saltugilia (Polemoniaceae)

 

Saltugilia australis

Saltugilia caruifolia

Saltugilia splendens subsp. grantii

Saltugilia latimeri

Saltugilia splendens subsp. splendens (GH)

Saltugilia splendens subsp. splendens (FS)

Percent Mapped

74.16

72.18

73.32

80.88

61.05

80.39

Total Trinity genes

92,672

51,020

63,625

63,057

69,371

62,667

Total Trinity transcripts

110,965

71,296

84,178

91,574

92,540

92,544

Percent GC

44.79

45.44

45.64

45.5

44.71

45.5

N50

446

446

547

668

467

661

Median contig length

263

303

320

345

319

341

Average contig length

407.51

424.47

483.93

544.76

432.03

540.55

Total assembled bases

45,219,574

30,263,050

40,736,482

49,885,494

39,980,145

50,024,785