Table 3 Distribution and frequency of SNPs and InDels in functional regions of the radish genome
Category | SNPs | InDels | ||||
|---|---|---|---|---|---|---|
Number | Percent (%) | Frequency (per bp) | Number | Percent (%) | Frequency (per bp) | |
Intergenic | 11,236 | 50.1 | 35,777.9 | 1413 | 14.9 | 284,501.1 |
Intron | 5483 | 24.5 | 73,317.5 | 1135 | 12.1 | 354,185 |
CDS | 5693 | 25.4 | 70,613 | 6888 | 73.0 | 58,362.4 |
Total | 22,412 | 100 | 17,936.8 | 9436 | 100 | 42,593.8 |