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Table 5 RH map evaluation of scaffolds generated by SALSA and LACHESIS for Capra hircus assembly

From: Scaffolding of long read assemblies using long range contact information

Metric

SALSA

LACHESIS

SALSA-OM

LACHESIS-OM

Orientation errors

146

600

33

31

Incorrect chromosome errors

52

32

21

0

Ordering errors

152

552

63

78

  1. SALSA-OM and LACHESIS-OM stands for the scaffolds generated on optical map scaffolds by SALSA and LACHESIS respectively