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Table 1 Trinity assemblies

From: Draft de novo transcriptome assembly and proteome characterization of the electric lobe of Tetronarce californica: a molecular tool for the study of cholinergic neurotransmission in the electric organ

Parameters

Trinity

 

Trinity + CD-HIT-EST

Assembly (Kmer)

Assembled Bases

Transcriptsa

Genesb

Scorec

 

Assembled Bases

Transcriptsa

Genesb

Scorec

01 (25)

132,763,501

104,902

79,707

-6105288705.62

 

122,806,861

95,964

72,213

-6115264651.77

02 (27)

132,707,939

104,844

79,093

-6053954533.82

 

122,869,910

95,906

71,537

-6110650415.91

03 (29)

130,039,526

103,169

77,834

-5967748885.21

 

120,327,821

94,415

70,473

-5976932627.27

04 (31)

125,968,101

100,868

76,610

-5932951277.04

 

116,388,010

92,306

69,295

-5939550282.37

  1. aNumber of Transcripts
  2. bNumber of Genes
  3. cDetonate RSEM-EVAL Score