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Fig. 2 | BMC Genomics

Fig. 2

From: Massively parallel nanowell-based single-cell gene expression profiling

Fig. 2

Sequence data from nanowell-based single-cell expression profiling. a Data analysis workflow. QC, quality control. b Quality control statistics for 924 Ba/F3 cells processed on one microchip, including total number of sequenced reads, alignment rate, number of mapped reads, total number of detected transcripts, percentage of transcripts corresponding to mitochondrial genes, and number of detected genes. Box plots indicate the interquartile range (IQR), horizontal lines are the median, whiskers extend to the most extreme data point no more than 1.5 x IQR from the box. c Median number of detected genes per cell for different sequencing depths. d Median number of detected transcripts per cell for different sequencing depths

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