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Table 2 FB4_DM that are predicted to be hyper-edited. Predictions with a yes in the last column are RepProfile’s most confident predictions

From: Predicting RNA hyper-editing with a novel tool when unambiguous alignment is impossible

Position

Gene

Most confident

chr2L:21705310–21707776

nolo

Yes

chr2R:1075216–1076448

rl

Yes

chr2R:1521733–1522952

Maf1

Yes

chr4:560886–562920

Pur-alpha

Yes

chrX:8927642–8929850

rdgA

Yes

chr3L:4361048–4362834

Cip4

No

chr3L:8019759–8024110

nmo

No

chr3R:1971337–1972661

Myo81F

No

chr3R:21609064–21611636

inR

No

chr3R:22450601–22453179

CG34376

No

chrX:11645168–11648276

Ptp10D

No

chrX:2132105–2133551

ph-p

No

  1. If there is a No in the last column, RepProfile was able to align reads without predicting hyper-editing at this repeat, but not predicting hyper-editing at these repeats yielded a lower posterior probability