Table 2 Summary statistics for πcc values when classifying 31 tumor types and ignoring sex of the samples across 1000 GA/KNN runs for each of two training/testing partitions (2000 runs total)
From: A comprehensive genomic pan-cancer classification using The Cancer Genome Atlas gene expression data
Type | Minimum | 1st Quartile | Median | Mean | 3rd Quartile | Maximum | Modal Prediction Accuracy |
|---|---|---|---|---|---|---|---|
ACC | 0.23 | 0.76 | 0.88 | 0.83 | 0.92 | 0.97 | 0.97 |
BLCA | 0.01 | 0.51 | 0.81 | 0.71 | 0.96 | 1.00 | 0.91 |
CHOL | 0.00 | 0.01 | 0.40 | 0.37 | 0.50 | 0.66 | 0.73 |
COAD | 0.18 | 0.77 | 0.85 | 0.83 | 0.91 | 0.98 | 0.99 |
DLBC | 0.65 | 0.82 | 0.89 | 0.87 | 0.94 | 0.98 | 1.00 |
GBM | 0.46 | 0.86 | 0.96 | 0.91 | 0.98 | 1.00 | 0.99 |
HNSC | 0.04 | 0.91 | 0.98 | 0.93 | 1.00 | 1.00 | 0.99 |
KICH | 0.00 | 0.88 | 0.92 | 0.86 | 0.96 | 0.99 | 0.96 |
KIRC | 0.00 | 0.98 | 1.00 | 0.93 | 1.00 | 1.00 | 0.96 |
KIRP | 0.00 | 0.79 | 0.97 | 0.85 | 1.00 | 1.00 | 0.92 |
LAML | 0.89 | 1.00 | 1.00 | 0.99 | 1.00 | 1.00 | 1.00 |
LGG | 0.56 | 0.99 | 1.00 | 0.97 | 1.00 | 1.00 | 1.00 |
LHIC | 0.04 | 0.97 | 0.99 | 0.94 | 1.00 | 1.00 | 0.98 |
LUAD | 0.00 | 0.88 | 0.96 | 0.88 | 0.99 | 1.00 | 0.96 |
LUSC | 0.03 | 0.67 | 0.92 | 0.78 | 0.97 | 1.00 | 0.88 |
MESO | 0.00 | 0.72 | 0.87 | 0.76 | 0.93 | 1.00 | 0.90 |
PAAD | 0.03 | 0.84 | 0.96 | 0.85 | 0.99 | 1.00 | 0.95 |
PCPG | 0.71 | 0.98 | 1.00 | 0.98 | 1.00 | 1.00 | 1.00 |
READ | 0.03 | 0.09 | 0.14 | 0.15 | 0.19 | 0.28 | 0.00 |
SARC | 0.03 | 0.78 | 0.91 | 0.83 | 0.96 | 1.00 | 0.96 |
SKCM | 0.00 | 0.93 | 0.97 | 0.90 | 0.99 | 1.00 | 0.97 |
THCA | 0.37 | 1.00 | 1.00 | 0.99 | 1.00 | 1.00 | 1.00 |
THYM | 0.08 | 0.90 | 0.99 | 0.89 | 1.00 | 1.00 | 0.94 |
UCS | 0.01 | 0.06 | 0.26 | 0.27 | 0.41 | 0.62 | 0.62 |
UVM | 0.52 | 0.95 | 0.99 | 0.95 | 1.00 | 1.000 | 1.00 |
BRCA | 0.01 | 0.98 | 0.99 | 0.97 | 1.00 | 1.00 | 0.99 |
CESC | 0.00 | 0.52 | 0.76 | 0.68 | 0.87 | 0.98 | 0.94 |
OV | 0.36 | 0.95 | 0.98 | 0.95 | 0.99 | 1.00 | 1.00 |
PRAD | 0.53 | 1.00 | 1.00 | 0.99 | 1.00 | 1.00 | 1.00 |
TGCT | 0.25 | 0.97 | 1.00 | 0.94 | 1.00 | 1.00 | 1.00 |
UCEC | 0.04 | 0.52 | 0.71 | 0.68 | 0.86 | 1.00 | 0.96 |