Table 5 Gene ranks from full female dataset, full male dataset, and the eight “matched” male datasets
From: A comprehensive genomic pan-cancer classification using The Cancer Genome Atlas gene expression data
Gene | Rank from full female dataset | Rank from full male dataset | Difference (F-M) | Mean (SD) rank from 8 matched male datasets | Difference (F-meanM) | |
|---|---|---|---|---|---|---|
Genes ranked higher using male samples than female samples | BNC1 | 932 | 45 | 887 | 54 (16) | 878 |
FAT2 | 392 | 90 | 302 | 143 (23) | 249 | |
KRT5 | 328 | 47 | 281 | 165 (57) | 163 | |
RNF43 | 299 | 94 | 205 | 81 (14) | 218 | |
S1PR5 | 281 | 99 | 181 | 98 (38) | 183 | |
ANKS4B | 245 | 96 | 148 | 115 (20) | 130 | |
CSTA | 218 | 93 | 125 | 129 (33) | 89 | |
ANXA8 | 161 | 48 | 113 | 121 (36) | 40 | |
KRT8 | 175 | 65 | 110 | 94 (22) | 81 | |
CLRN3 | 204 | 98 | 106 | 86 (15) | 118 | |
Genes ranked higher using female samples than male samples | FOXA1 | 82 | 417 | −335 | 237 (92) | −155 |
AMY1A | 100 | 370 | −270 | 386 (162) | −286 | |
HPN | 74 | 336 | −262 | 256 (94) | −182 | |
LAD1 | 45 | 269 | −224 | 129 (40) | −84 | |
PDZK1 | 83 | 293 | −210 | 228 (79) | −145 | |
TMC5 | 55 | 241 | −186 | 139 (50) | −84 | |
KIF12 | 89 | 249 | −160 | 324 (135) | −235 | |
STK32A | 79 | 226 | −147 | 123 (28) | −44 | |
CFAP221 | 81 | 187 | −106 | 94 (21) | −13 | |
TRIM29 | 86 | 188 | −102 | 143 (25) | −57 | |
HOXA11 | 84 | 184 | −100 | 291 (77) | −207 |