Fig. 3
From: Genome analysis of E. coli isolated from Crohn’s disease patients
Genomic comparison of 14 CD-associated strains with pathogenic and non-pathogenic E. coli genomes. Maximum likelihood unrooted tree is based on the core genes. Strains from this study are colored black (here and on the images below indicated as Crohn); previously published CDEC (here and on the images below indicated as CrohnLit) are grey; nonpathogenic, green; pathogenic, pink; strains of undetermined pathogenicity, white. Derivatives of one laboratory strain are merged. Strains containing a plasmid homologous to plLF82 and pJJ1886 are indicated. Pdu operons from LF82 are marked with red