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Table 4 Genomic estimates of narrow-sense heritabilities (h 2) and predictive abilities (r gy ) for the E. benthamii and E. pellita breeding populations using chromosome-specific SNP sets

From: Genomic prediction in contrast to a genome-wide association study in explaining heritable variation of complex growth traits in breeding populations of Eucalyptus

 

E. benthamii

E. pellita

Chr

Number of SNPs

DBH

WV

Number of SNPs

DBH

HT

WV

h 2 (SE)

r gy (SE)

h 2 (SE)

r gy (SE)

h 2 (SE)

r gy (SE)

h 2 (SE)

r gy (SE)

h 2 (SE)

r gy (SE)

1

848

0.162 (0.004)

0.070 (0.048)

0.161 (0.003)

0.071 (0.037)

1329

0.240 (0.004)

0.336 (0.034)

0.223 (0.006)

0.327 (0.042)

0.241 (0.004)

0.337 (0.031)

2

1672

0.186 (0.003)

0.085 (0.036)

0.183 (0.004)

0.071 (0.034)

2245

0.228 (0.004)

0.313 (0.033)

0.188 (0.004)

0.272 (0.040)

0.218 (0.004)

0.303 (0.036)

3

1544

0.195 (0.004)

0.170 (0.036)

0.207 (0.004)

0.185 (0.040)

2026

0.282 (0.007)

0.363 (0.042)

0.172 (0.003)

0.282 (0.046)

0.267 (0.006)

0.355 (0.043)

4

886

0.180 (0.004)

0.134 (0.036)

0.171 (0.004)

0.104 (0.027)

1303

0.256 (0.008)

0.315 (0.045)

0.203 (0.003)

0.271 (0.044)

0.251 (0.009)

0.294 (0.049)

5

1356

0.195 (0.004)

0.123 (0.051)

0.190 (0.004)

0.123 (0.052)

1872

0.303 (0.006)

0.379 (0.037)

0.227 (0.007)

0.325 (0.044)

0.277 (0.006)

0.353 (0.040)

6

1440

0.166 (0.004)

0.090 (0.040)

0.157 (0.002)

0.063 (0.033)

2012

0.277 (0.007)

0.375 (0.031)

0.197 (0.004)

0.294 (0.040)

0.274 (0.008)

0.369 (0.037)

7

1207

0.219 (0.006)

0.187 (0.051)

0.210 (0.006)

0.158 (0.046)

1594

0.226 (0.003)

0.337 (0.031)

0.168 (0.003)

0.241 (0.047)

0.217 (0.003)

0.323 (0.038)

8

1771

0.183 (0.005)

0.082 (0.063)

0.168 (0.004)

0.059 (0.050)

2583

0.212 (0.006)

0.306 (0.038)

0.185 (0.003)

0.267 (0.040)

0.222 (0.004)

0.316 (0.037)

9

940

0.170 (0.003)

0.121 (0.035)

0.164 (0.004)

0.100 (0.033)

1381

0.228 (0.004)

0.330 (0.020)

0.182 (0.004)

0.285 (0.034)

0.233 (0.006)

0.332 (0.027)

10

1034

0.152 (0.002)

0.059 (0.037)

0.150 (0.002)

0.047 (0.041)

1448

0.218 (0.003)

0.339 (0.037)

0.184 (0.004)

0.292 (0.050)

0.224 (0.004)

0.353 (0.041)

11

1089

0.195 (0.004)

0.138 (0.040)

0.193 (0.006)

0.143 (0.041)

1713

0.250 (0.005)

0.338 (0.024)

0.201 (0.005)

0.304 (0.042)

0.258 (0.006)

0.350 (0.026)

All

13,787

0.267 (0.008)

0.162 (0.044)

0.243 (0.008)

0.146 (0.039)

19,506

0.455 (0.005)

0.441 (0.019)

0.283 (0.008)

0.342 (0.042)

0.418 (0.005)

0.425 (0.028)

  1. DBH, cm (Diameter at Breast Height), HT, m (Total Height) and WV, m 3 (Wood Volume), SE (Standard Error)
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