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Table 3 Haplotype (HAP) ID and position as well as haplotype effect on seed weight estimated based on 166 accessions grown at Beltsville, MD in 2012 and 2013, and on 3753 accessions from USDA Soybean Germplasm Collection at Germplasm Resources Information Network (GRIN)

From: Identification of QTL with large effect on seed weight in a selective population of soybean with genome-wide association and fixation index analyses

SNP ID HAP block Seed weight for Hap within 166 accessions Seed weight for Hap within 3753 accessions
HAP block ID HAP block position HAP name Number of accessions 2012 (g) 2013 (g) Number of accessions Seed weight in GRIN (g)
Gm04_20336481 Block 1 24,300,386–39,511,809 HAP1 26 11.2 11.8 290 10.0
Gm04_20729591 HAP2 25 23.6 26.1 1104 20.7
Gm04_24276060 HAP3 17 13.2 13.6 181 17.0
Gm04_27912357 HAP4 14 20.0 23.2 121 19.4
Gm17_2500016 Block 2 2,485,630-2,553,448 HAP1 69 13.8 14.7 1435 14.2
Gm17_2500333 HAP2 44 23.2 25.9 1022 22.3
  HAP3 27 10.8 11.4 286 9.4
Gm17_8635426 Block 3 8,296,198-8,464,870 HAP1 68 19.9 22.2 2151 18.9
  HAP2 47 10.2 10.2 512 9.3
  HAP3 21 20.3 23.4 201 19.5