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Table 3 Counts and lengths of alignments to the reference

From: Hybrid assembly with long and short reads improves discovery of gene family expansions

  Accession ALLPATHS PBJelly Alpaca
Count, 2Kbp or longer HM034 296 553 2058
HM056 257 436 1652
HM340 273 443 1947
Count, Under 2Kbp HM034 14,990 14,911 18,888
HM056 14,665 14,110 14,603
HM340 18,206 17,225 19,334
Average length HM034 294 388 769
HM056 291 373 767
HM340 271 336 730
  1. In each of three Medicago accessions assembled three ways, the Alpaca assembly contained the most repeats and the largest average repeat length