Table 3 P-values of the selected 7 SNPs on mouse chromosome 19 for the association tests with 52 phenotypes using the TATES, MANOVA, MultiPhen, mCPC, and GATE methods
From: GATE: an efficient procedure in study of pleiotropic genetic associations
snpid | TATES | MANOVA | MultiPhen | mCPC | GATE |
|---|---|---|---|---|---|
rs13483499 | 3.27 ×10−3 | 1.79 ×10−4 | 3.34 ×10−4 | 1.63 ×10−4 | 6.30 ×10−5 |
rs13459157 | 4.05 ×10−3 | 2.36 ×10−4 | 4.20 ×10−4 | 2.17 ×10−4 | 8.80 ×10−5 |
rs13483502 | 4.23 ×10−2 | 1.01 ×10−3 | 2.22 ×10−4 | 9.97 ×10−4 | 1.67 ×10−4 |
rs6259521 | 3.00 ×10−3 | 1.11 ×10−2 | 4.63 ×10−3 | 6.41 ×10−4 | 1.73 ×10−4 |
rs13483579 | 1.19 ×10−3 | 6.15 ×10−2 | 6.17 ×10−2 | 5.44 ×10−3 | 1.74 ×10−4 |
rs13483598 | 4.53 ×10−3 | 3.16 ×10−3 | 8.07 ×10−4 | 2.85 ×10−3 | 1.36 ×10−4 |
rs13483601 | 3.82 ×10−3 | 2.82 ×10−3 | 7.45 ×10−4 | 1.84 ×10−3 | 8.50 ×10−5 |