Skip to main content

Table 3 Amount of annotated miRNAs, identified miRNA clusters and the number of miRNAs in clusters, as well as known conserved and non-conserved miRNA families in N. furzeri (Nfu), D. rerio (Dre), O. latipes (Ola), G. aculeatus (Gac) and T. rubripes (Fru)

From: A miRNA catalogue and ncRNA annotation of the short-living fish Nothobranchius furzeri

Species

#miRNAs

#miRNA clusters

#miRNAs in clusters

#mirBase families

#unknown familes

nfu

754

83

213

94 (333)

383 (421)

dre

765

96

305

99 (307)

302 (458)

ola

366

58

151

104 (269)

55 (97)

gac

504

68

299

102 (413)

63 (91)

fru

337

59

143

99 (278)

51 (59)

  1. In brackets, the amount of miRNAs associated to the identified miRNA families are given. For detailed lists of miRNA family assignments, see Supplement Table 4