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Fig. 6 | BMC Genomics

Fig. 6

From: Identification of fasciclin-like arabinogalactan proteins in textile hemp (Cannabis sativa L.): in silico analyses and gene expression patterns in different tissues

Fig. 6

Modeling of representative CsaFLAs. a Homology model of FLA10 showing right and left views. Left: ribbon model showing secondary structures. Right: space-filled model. Both fasciclin (FAS) domains are shown in turquoise and the H1 and H2 conserved regions characteristic of FAS domains within both FAS domains are shown in blue, AGP domains are shown in red and GPI anchors are shown in purple. Conserved aliphatic amino acids (A, L and V, V) on either side of conserved LH motif (pink) and V, L and L on either side of YH motifs (pink) believed to be involved in adhesion are shown in grey whereas polar Ser is shown in green. Residues in white do not belong to any particular domain. b Homology model of FLA11 showing right and left views. Left: ribbon model showing secondary structures. Right: space-filled model. Fasciclin (FAS) domain is shown in turquoise and the H1 and H2 conserved regions characteristic of FAS domain within a single continuous FAS domain are shown in blue, AGP domains are shown in red and GPI anchors are shown in purple. Conserved aliphatic amino acids (L, V) on either side of conserved YH motif (pink) believed to be involved in adhesion are shown in grey. Conserved Asn linked to 2 N-acetyl glucosamine moieties are shown in yellow. Residues in white do not belong to any particular domain

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