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Table 3 Conserved motifs in the promoters of FLAs from group II and V

From: Identification of fasciclin-like arabinogalactan proteins in textile hemp (Cannabis sativa L.): in silico analyses and gene expression patterns in different tissues

FLAs

Conserved motif

(MEME)

Similar motifs

(Tomtom/JASPAR CORE 2016 plants)

Function

p-value

Group II

MA0554.1 (SOC1)

Transcription activator controlling flowering time. Probably also involved in photoperiod perception.

5.39e-05

Group V

MA1038.1 (MYB3)

Repression of the phenylpropanoid biosynthesis-related genes. Response to salt stress, wounding, ABA, SA.

1.59e-02

  1. The first motif in each table cell is the one found in the database, the second motif is the one found in the promoters of hemp FLAs. The function and computed p-value are indicated.