Fig. 2
From: High resolution measurement of DUF1220 domain copy number from whole genome sequence data
Read alignment ambiguity between NBPF genes using the ‘best’ alignment strategy with Bowtie2. For each clade (a-f), simulated reads from individual domains (columns) were mapped back to the reference genome and the percentage of reads aligning to each domain was calculated (rows). The shade of red is proportional to the percentage of reads aligning to each gene (solid red = 100% alignment and white = 0% alignment)